{ "_id": "6a2841cd732311cd875824c7", "Package": "chmsflow", "Type": "Package", "Title": "Transforming and Harmonizing CHMS Variables", "Version": "0.1.0", "Authors@R": "c(\nperson(\"Rafidul\", \"Islam\", email = \"raislam@ohri.ca\", role = c(\"aut\", \"cre\", \"cph\"), comment = c(ORCID = \"0009-0008-3072-5623\")),\nperson(\"Douglas\", \"Manuel\", email = \"dmanuel@ohri.ca\", role = c(\"aut\", \"cph\"), comment = c(ORCID = \"0000-0003-0912-0845\")),\nperson(\"Therese\", \"Chan\", email = \"TChan@bruyere.org\", role = c(\"ctb\"), comment = c(ORCID = \"0009-0002-2291-7218\")),\nperson(\"The Ottawa Hospital Research Institute\", role = c(\"cph\")))", "Description": "Harmonizes variables from the Canadian Health Measures\nSurvey (CHMS) across cycles 1-6 (2007-2019), producing\nconsistent, analysis-ready variables for use with CHMS data.\nRecoding is data-driven through metadata tables and applied\nwith recodeflow::rec_with_table() from the 'recodeflow'\npackage. The recoding approach builds on sjmisc::rec() from the\n'sjmisc' package (Ludecke 2018) .", "License": "MIT + file LICENSE", "URL": "https://github.com/Big-Life-Lab/chmsflow,\nhttps://big-life-lab.github.io/chmsflow/", "BugReports": "https://github.com/Big-Life-Lab/chmsflow/issues", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.3", "VignetteBuilder": "quarto", "Config/build/clean-inst-doc": "FALSE", "LazyData": "true", "Repository": "https://big-life-lab.r-universe.dev", "Date/Publication": "2026-06-09 15:30:08 UTC", "RemoteUrl": "https://github.com/big-life-lab/chmsflow", "RemoteRef": "HEAD", "RemoteSha": "55550b80885b223e70ee618b02731f5a98b3d548", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-09 16:35:22 UTC", "User": "root" }, "Author": "Rafidul Islam [aut, cre, cph] (ORCID:\n),\nDouglas Manuel [aut, cph] (ORCID:\n),\nTherese Chan [ctb] (ORCID: ),\nThe Ottawa Hospital Research Institute [cph]", "Maintainer": "Rafidul Islam ", "MD5sum": "29e771ff379605fd2b70e4123722ecf5", "_user": "big-life-lab", "_type": "src", "_file": "chmsflow_0.1.0.tar.gz", "_fileid": "d5daca735213b34ece4d77905793a0a7670d909569b65a58ed264dca1289cf11", "_filesize": 3205824, "_sha256": "d5daca735213b34ece4d77905793a0a7670d909569b65a58ed264dca1289cf11", "_created": "2026-06-09T16:35:22.000Z", "_published": "2026-06-09T16:39:41.804Z", "_distro": "noble", "_jobs": [ { "job": 80375435311, "time": 134, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "ERROR", "artifact": "7514055261" }, { "job": 80375435059, "time": 126, "config": "linux-release-x86_64", "r": "4.6.0", "check": "ERROR", "artifact": "7514052501" }, { "job": 80375435294, "time": 198, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "ERROR", "artifact": "7514081587" }, { "job": 80375435000, "time": 160, "config": "macos-release-arm64", "r": "4.6.0", "check": "ERROR", "artifact": "7514065535" }, { "job": 80374731786, "time": 209, "config": "source", "r": "4.6.0", "check": "ERROR", "artifact": "7514000511" }, { "job": 80375434985, "time": 122, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7514050233" }, { "job": 80375434988, "time": 127, "config": "windows-devel", "r": "4.7.0", "check": "ERROR", "artifact": "7514052998" }, { "job": 80375434996, "time": 218, "config": "windows-oldrel", "r": "4.5.3", "check": "ERROR", "artifact": "7514089347" }, { "job": 80375435017, "time": 149, "config": "windows-release", "r": "4.6.0", "check": "ERROR", "artifact": "7514061452" } ], "_buildurl": "https://github.com/r-universe/big-life-lab/actions/runs/27220767477", "_status": "failure", "_host": "GitHub-Actions", "_upstream": "https://github.com/big-life-lab/chmsflow", "_commit": { "id": "55550b80885b223e70ee618b02731f5a98b3d548", "author": "Rafidul Islam ", "committer": "Rafidul Islam ", "message": "Announced CRAN release date on NEWS.md and deleted cran-comments.md\n", "time": 1781019008 }, "_maintainer": { "name": "Rafidul Islam", "email": "raislam@ohri.ca", "login": "rafdoodle", "description": "", "uuid": 134554829 }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.1.0", "role": "Depends" }, { "package": "dplyr", "role": "Imports" }, { "package": "haven", "role": "Imports" }, { "package": "purrr", "role": "Imports" }, { "package": "recodeflow", "role": "Imports" }, { "package": "DT", "role": "Suggests" }, { "package": "kableExtra", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "quarto", "role": "Suggests" }, { "package": "readr", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" } ], "_owner": "big-life-lab", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2025-26", "n": 1 }, { "week": "2025-28", "n": 1 }, { "week": "2025-31", "n": 10 }, { "week": "2025-32", "n": 2 }, { "week": "2025-38", "n": 12 }, { "week": "2025-39", "n": 3 }, { "week": "2026-21", "n": 2 }, { "week": "2026-22", "n": 1 }, { "week": "2026-23", "n": 3 }, { "week": "2026-24", "n": 1 } ], "_tags": [ { "name": "v0.1.0", "date": "2026-05-22" } ], "_stars": 1, "_contributors": [ { "user": "rafdoodle", "count": 111, "uuid": 134554829 }, { "user": "dougmanuel", "count": 15, "uuid": 13246138 } ], "_userbio": { "uuid": 43787310, "type": "organization", "name": "Big Life Lab", "description": "https://projectbiglife.ca" }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/chmsflow" }, "_devurl": "https://github.com/big-life-lab/chmsflow", "_pkgdown": "https://big-life-lab.github.io/chmsflow/", "_searchresults": 8, "_quarto": true, "_topics": [ "quarto" ], "_rbuild": "4.6.0", "_assets": [ "extra/chmsflow.html", "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_homeurl": "https://github.com/big-life-lab/chmsflow", "_realowner": "big-life-lab", "_cranurl": true, "_releases": [ { "version": "0.1.0", "date": "2026-06-08" } ], "_exports": [ "adjust_dbp", "adjust_sbp", "aggregate_meds_by_person", "calculate_exercise_daily_avg", "calculate_exercise_weekly", "calculate_fv_daily_cycles1to2", "calculate_fv_daily_cycles3to6", "calculate_gfr", "calculate_household_income", "calculate_nonhdl", "calculate_pack_years", "calculate_waist_height_ratio", "categorize_ckd", "categorize_diet_quality", "categorize_exercise", "categorize_income_quintile", "categorize_nonhdl", "derive_alcohol_risk", "derive_alcohol_risk_detailed", "derive_cvd_family_history", "derive_cvd_personal_history", "derive_diabetes_status", "derive_hypertension", "derive_hypertension_adj", "derive_hypertension_control", "derive_hypertension_control_adj", "is_ace_inhibitor", "is_ace_med_cycles1to2", "is_any_antihtn_med", "is_any_htn_med_cycles1to2", "is_bb_med_cycles1to2", "is_beta_blocker", "is_calcium_channel_blocker", "is_ccb_med_cycles1to2", "is_diab_med_cycles1to2", "is_diabetes_med", "is_diur_med_cycles1to2", "is_diuretic", "is_lowest_income_quintile", "is_misc_htn_med_cycles1to2", "is_nsaid", "is_nsaid_med_cycles1to2", "is_other_antihtn_med", "recode_after_meds", "recode_meds_cycles1to2", "recode_meds_cycles3to6" ], "_datasets": [ { "name": "cycle1", "title": "Canadian Health Measures Survey (CHMS) Cycle 1", "object": "cycle1", "class": [ "data.frame" ], "fields": [ "clinicid", "alc_11", "alc_17", "alc_18", "alcdwky", "amsdmva1", "amsdmva2", "amsdmva3", "amsdmva4", "amsdmva5", "amsdmva6", "amsdmva7", "bir_14", "bpmdpbpd", "bpmdpbps", "ccc_32", "ccc_51", "ccc_61", "ccc_63", "ccc_81", "clc_age", "clc_sex", "dhh_ms", "dhhdhsz", "edudr04", "fmh_11", "fmh_12", "fmh_13", "fmh_14", "fmh_15", "gendhdi", "gendmhi", "gen_15", "gen_18", "gen_20", "gfvd17y", "gfvd18y", "gfvd19y", "gfvd20y", "gfvd22y", "gfvd23y", "hwm_11cm", "hwm_13kg", "hwm_14cm", "hwmdbmi", "inc_21", "incfimp4", "lab_alkp", "lab_alt", "lab_bcre", "lab_bpb", "lab_ca", "lab_chol", "lab_ggt", "lab_hba1", "lab_hdl", "lab_vitd", "lbf_soc", "lbfdwsl", "lbfdhpw", "mdcd11y", "phc_11", "sdcdcgt", "sdcfimm", "slp_11", "slp_12", "smk_11", "smk_21", "smk_31", "smk_41", "smk_42", "smk_52", "smk_53", "smk_54", "smkdsty", "wgt_full", "wsdd14y" ], "rows": 50, "table": true, "tojson": true }, { "name": "cycle1_meds", "title": "Canadian Health Measures Survey (CHMS) Cycle 1 Medications", "object": "cycle1_meds", "class": [ "data.frame" ], "fields": [ "CLINICID", "ATC_101A", "ATC_102A", "ATC_103A", "ATC_104A", "ATC_105A", "ATC_106A", "ATC_107A", "ATC_108A", "ATC_109A", "ATC_110A", "ATC_111A", "ATC_112A", "ATC_113A", "ATC_114A", "ATC_115A", "ATC_201A", "ATC_202A", "ATC_203A", "ATC_204A", "ATC_205A", "ATC_206A", "ATC_207A", "ATC_208A", "ATC_209A", "ATC_210A", "ATC_211A", "ATC_212A", "ATC_213A", "ATC_214A", "ATC_215A", "ATC_131A", "ATC_132A", "ATC_133A", "ATC_134A", "ATC_135A", "ATC_231A", "ATC_232A", "ATC_233A", "ATC_234A", "ATC_235A", "MHR_101B", "MHR_102B", "MHR_103B", "MHR_104B", "MHR_105B", "MHR_106B", "MHR_107B", "MHR_108B", "MHR_109B", "MHR_110B", "MHR_111B", "MHR_112B", "MHR_113B", "MHR_114B", "MHR_115B", "MHR_131B", "MHR_132B", "MHR_133B", "MHR_134B", "MHR_135B", "MHR_201B", "MHR_202B", "MHR_203B", "MHR_204B", "MHR_205B", "MHR_206B", "MHR_207B", "MHR_208B", "MHR_209B", "MHR_210B", "MHR_211B", "MHR_212B", "MHR_213B", "MHR_214B", "MHR_215B", "MHR_231B", "MHR_232B", "MHR_233B", "MHR_234B", "MHR_235B" ], "rows": 50, "table": true, "tojson": true }, { "name": "cycle2", "title": "Canadian Health Measures Survey (CHMS) Cycle 2", "object": "cycle2", "class": [ "data.frame" ], "fields": [ "clinicid", "alc_11", "alc_17", "alc_18", "alcdwky", "ammdmva1", "ammdmva2", "ammdmva3", "ammdmva4", "ammdmva5", "ammdmva6", "ammdmva7", "bir_14", "bpmdpbpd", "bpmdpbps", "ccc_32", "ccc_51", "ccc_61", "ccc_63", "ccc_81", "clc_age", "clc_sex", "dhh_ms", "dhhdhsz", "edudr04", "fmh_11", "fmh_12", "fmh_13", "fmh_14", "fmh_15", "gendhdi", "gendmhi", "gen_15", "gen_18", "gen_20", "gfvd17y", "gfvd18y", "gfvd19y", "gfvd20y", "gfvd22y", "gfvd23y", "hwm_11cm", "hwm_13kg", "hwm_14cx", "hwmdbmi", "inc_21", "incfimp4", "lab_alkp", "lab_alt", "lab_bcre", "lab_bpb", "lab_ca", "lab_chol", "lab_ggt", "lab_hba1", "lab_hdl", "lab_vitd", "lbf_soc", "lbfdwsl", "lbfdhpw", "mdcd11y", "phc_11", "sdcdcgt", "sdcfimm", "slp_11", "slp_12", "smk_11", "smk_21", "smk_31", "smk_41", "smk_42", "smk_52", "smk_53", "smk_54", "smkdsty", "wgt_full", "wsdd14y" ], "rows": 50, "table": true, "tojson": true }, { "name": "cycle2_meds", "title": "Canadian Health Measures Survey (CHMS) Cycle 2 Medications", "object": "cycle2_meds", "class": [ "data.frame" ], "fields": [ "clinicid", "atc_101a", "atc_102a", "atc_103a", "atc_104a", "atc_105a", "atc_106a", "atc_107a", "atc_108a", "atc_109a", "atc_110a", "atc_111a", "atc_112a", "atc_113a", "atc_114a", "atc_115a", "atc_201a", "atc_202a", "atc_203a", "atc_204a", "atc_205a", "atc_206a", "atc_207a", "atc_208a", "atc_209a", "atc_210a", "atc_211a", "atc_212a", "atc_213a", "atc_214a", "atc_215a", "atc_131a", "atc_132a", "atc_133a", "atc_134a", "atc_135a", "atc_231a", "atc_232a", "atc_233a", "atc_234a", "atc_235a", "mhr_101b", "mhr_102b", "mhr_103b", "mhr_104b", "mhr_105b", "mhr_106b", "mhr_107b", "mhr_108b", "mhr_109b", "mhr_110b", "mhr_111b", "mhr_112b", "mhr_113b", "mhr_114b", "mhr_115b", "mhr_131b", "mhr_132b", "mhr_133b", "mhr_134b", "mhr_135b", "mhr_201b", "mhr_202b", "mhr_203b", "mhr_204b", "mhr_205b", "mhr_206b", "mhr_207b", "mhr_208b", "mhr_209b", "mhr_210b", "mhr_211b", "mhr_212b", "mhr_213b", "mhr_214b", "mhr_215b", "mhr_231b", "mhr_232b", "mhr_233b", "mhr_234b", "mhr_235b" ], "rows": 50, "table": true, "tojson": true }, { "name": "cycle3", "title": "Canadian Health Measures Survey (CHMS) Cycle 3", "object": "cycle3", "class": [ "data.frame" ], "fields": [ "clinicid", "alc_11", "alc_17", "alc_18", "alcdwky", "ammdmva1", "ammdmva2", "ammdmva3", "ammdmva4", "ammdmva5", "ammdmva6", "ammdmva7", "bir_14", "bpmdpbpd", "bpmdpbps", "ccc_32", "ccc_51", "ccc_61", "ccc_63", "ccc_81", "clc_age", "clc_sex", "dhh_ms", "dhhdhsz", "edudr04", "fmh_11", "fmh_12", "fmh_13", "fmh_14", "fmh_15", "gendhdi", "gendmhi", "gen_15", "gen_18", "gen_20", "gfvd17ay", "gfvd17by", "gfvd17cy", "gfvd17dy", "gfvd18y", "gfvd19y", "gfvd20y", "gfvd22y", "gfvd23y", "hwm_11cm", "hwm_13kg", "hwm_14cx", "hwmdbmi", "imm_03", "ipadttpa", "lab_alkp", "lab_bcre", "lab_bpb", "lab_ca", "lab_chol", "lab_ggt", "lab_hba1", "lab_hdl", "lab_vids", "lafcso01", "lafdwsl", "lfh_16", "mdcd04y", "pgdcgt", "phc_11", "slp_11", "slp_12", "smk_11", "smk_21", "smk_31", "smk_41", "smk_42", "smk_52", "smk_53", "smk_54", "smkdsty", "thi_01", "thifimp4", "wgt_full", "wsdd34y", "wsdd35y" ], "rows": 50, "table": true, "tojson": true }, { "name": "cycle3_meds", "title": "Canadian Health Measures Survey (CHMS) Cycle 3 Medications", "object": "cycle3_meds", "class": [ "data.frame" ], "fields": [ "clinicid", "meucatc", "npi_25b" ], "rows": 4000, "table": true, "tojson": true }, { "name": "cycle4", "title": "Canadian Health Measures Survey (CHMS) Cycle 4", "object": "cycle4", "class": [ "data.frame" ], "fields": [ "alc_11", "alc_17", "alc_18", "alcdwky", "ammdmva1", "ammdmva2", "ammdmva3", "ammdmva4", "ammdmva5", "ammdmva6", "ammdmva7", "bir_14", "bpmdpbpd", "bpmdpbps", "ccc_32", "ccc_51", "ccc_61", "ccc_63", "ccc_81", "clc_age", "clc_sex", "clinicid", "dhh_ms", "dhhdhsz", "edudr04", "fmh_11", "fmh_12", "fmh_13", "fmh_14", "fmh_15", "gen_15", "gen_18", "gen_20", "gendhdi", "gendmhi", "gfvd17ay", "gfvd17by", "gfvd17cy", "gfvd17dy", "gfvd18y", "gfvd19y", "gfvd20y", "gfvd22y", "gfvd23y", "hwm_11cm", "hwm_13kg", "hwm_14cx", "hwmdbmi", "imm_03", "lab_alkp", "lab_alt", "lab_bcre", "lab_bpb", "lab_ca", "lab_chol", "lab_ggt", "lab_hba1", "lab_hdl", "lab_vids", "lafcoc11", "lafdwsl", "lfh_16", "mdcd04y", "paadtot", "pgdcgt", "phc_11", "slp_11", "slp_12", "smk_11", "smk_21", "smk_31", "smk_41", "smk_42", "smk_52", "smk_53", "smk_54", "smkdsty", "thi_01", "thifimp4", "wgt_full", "wsdd34y", "wsdd35y" ], "rows": 50, "table": true, "tojson": true }, { "name": "cycle4_meds", "title": "Canadian Health Measures Survey (CHMS) Cycle 4 Medications", "object": "cycle4_meds", "class": [ "data.frame" ], "fields": [ "CLINICID", "MEUCATC", "NPI_25B" ], "rows": 4050, "table": true, "tojson": true }, { "name": "cycle5", "title": "Canadian Health Measures Survey (CHMS) Cycle 5", "object": "cycle5", "class": [ "data.frame" ], "fields": [ "alc_11", "alc_17", "alc_18", "alcdwky", "ammdmva1", "ammdmva2", "ammdmva3", "ammdmva4", "ammdmva5", "ammdmva6", "ammdmva7", "bir_14", "bpmdpbpd", "bpmdpbps", "ccc_32", "ccc_51", "ccc_59", "ccc_61", "ccc_63", "ccc_81", "clc_age", "clc_sex", "clinicid", "dhh_ms", "dhhdhsz", "edudr04", "gen_025", "gen_045", "gen_055", "gendhdi", "gendmhi", "gfvd17ay", "gfvd17by", "gfvd17cy", "gfvd17dy", "gfvd18y", "gfvd19y", "gfvd20y", "gfvd22y", "gfvd23y", "hwm_11cm", "hwm_13kg", "hwm_14cx", "hwmdbmi", "img_03", "inc_hhld", "incfhhld", "lab_alkp", "lab_bcre", "lab_bpb", "lab_ca", "lab_chol", "lab_ggt", "lab_hba1", "lab_hdl", "lab_una", "lab_vids", "lafcoc16", "lafdwsl", "lmh_016", "mdcd04y", "paadtot", "pgdcgt", "prs_11", "smk_11", "smk_21", "smk_31", "smk_41", "smk_42", "smk_52", "smk_53", "smk_54", "smkdsty", "spa_020", "wgt_full", "wsdd34y", "wsdd35y" ], "rows": 50, "table": true, "tojson": true }, { "name": "cycle5_meds", "title": "Canadian Health Measures Survey (CHMS) Cycle 5 Medications", "object": "cycle5_meds", "class": [ "data.frame" ], "fields": [ "clinicid", "meucatc", "npi_25b" ], "rows": 3800, "table": true, "tojson": true }, { "name": "cycle6", "title": "Canadian Health Measures Survey (CHMS) Cycle 6", "object": "cycle6", "class": [ "data.frame" ], "fields": [ "CLINICID", "ALC_11", "ALC_17", "ALC_18", "ALCDWKY", "AMMDMVA1", "AMMDMVA2", "AMMDMVA3", "AMMDMVA4", "AMMDMVA5", "AMMDMVA6", "AMMDMVA7", "BIR_14", "BPMDPBPD", "BPMDPBPS", "CCC_32", "CCC_51", "CCC_59", "CCC_61", "CCC_63", "CCC_81", "CLC_AGE", "CLC_SEX", "DHH_MS", "DHHDHSZ", "EDUDR04", "GEN_025", "GEN_045", "GEN_055", "GENDHDI", "GENDMHI", "GFVD17AY", "GFVD17BY", "GFVD17CY", "GFVD17DY", "GFVD18Y", "GFVD19Y", "GFVD20Y", "GFVD22Y", "GFVD23Y", "HWM_11CM", "HWM_13KG", "HWM_14CX", "HWMDBMI", "IMG_03", "LAB_ALKP", "LAB_ALT", "LAB_BCRE", "LAB_BPB", "LAB_CA", "LAB_CHOL", "LAB_GGT", "LAB_HBA1", "LAB_HDL", "LAB_UNA", "LAB_VIDS", "LAFCOC16", "LAFDWSL", "LMH_016", "MDCD04Y", "PAADTOT", "PGDCGT", "PRS_11", "SMK_11", "SMK_21", "SMK_31", "SMK_41", "SMK_42", "SMK_52", "SMK_53", "SMK_54", "SMKDSTY", "SPA_020", "THI_01", "THIFIMP4", "WGT_FULL", "WSDD34Y", "WSDD35Y" ], "rows": 50, "table": true, "tojson": true }, { "name": "cycle6_meds", "title": "Canadian Health Measures Survey (CHMS) Cycle 6 Medications", "object": "cycle6_meds", "class": [ "data.frame" ], "fields": [ "CLINICID", "MEUCATC", "NPI_25B" ], "rows": 3850, "table": true, "tojson": true }, { "name": "variable_details", "title": "variable-details.csv", "object": "variable_details", "class": [ "data.frame" ], "fields": [ "variable", "dummyVariable", "typeEnd", "databaseStart", "variableStart", "typeStart", "recEnd", "numValidCat", "catLabel", "catLabelLong", "units", "recStart", "catStartLabel", "variableStartShortLabel", "variableStartLabel", "notes", "X" ], "rows": 1111, "table": true, "tojson": true }, { "name": "variables", "title": "variables.csv", "object": "variables", "class": [ "data.frame" ], "fields": [ "variable", "label", "labelLong", "section", "subject", "variableType", "units", "databaseStart", "variableStart" ], "rows": 211, "table": true, "tojson": true } ], "_help": [ { "page": "adjust_dbp", "title": "Adjusted diastolic blood pressure", "topics": [ "adjust_dbp" ] }, { "page": "adjust_sbp", "title": "Adjusted systolic blood pressure", "topics": [ "adjust_sbp" ] }, { "page": "aggregate_meds_by_person", "title": "Aggregate medication variables to one row per person", "topics": [ "aggregate_meds_by_person" ] }, { "page": "calculate_exercise_daily_avg", "title": "Average daily minutes of moderate-to-vigorous physical activity (MVPA) from accelerometer data", "topics": [ "calculate_exercise_daily_avg" ] }, { "page": "calculate_exercise_weekly", "title": "Weekly minutes of moderate-to-vigorous physical activity (MVPA) from daily average", "topics": [ "calculate_exercise_weekly" ] }, { "page": "calculate_fv_daily_cycles1to2", "title": "Daily fruit and vegetable consumption in a year - cycles 1-2", "topics": [ "calculate_fv_daily_cycles1to2" ] }, { "page": "calculate_fv_daily_cycles3to6", "title": "Daily fruit and vegetable consumption in a year - cycles 3-6", "topics": [ "calculate_fv_daily_cycles3to6" ] }, { "page": "calculate_gfr", "title": "Estimated glomerular filtration rate (GFR)", "topics": [ "calculate_gfr" ] }, { "page": "calculate_household_income", "title": "Adjusted total household income", "topics": [ "calculate_household_income" ] }, { "page": "calculate_nonhdl", "title": "Non-HDL cholesterol level", "topics": [ "calculate_nonhdl" ] }, { "page": "calculate_pack_years", "title": "Smoking pack-years", "topics": [ "calculate_pack_years" ] }, { "page": "calculate_waist_height_ratio", "title": "Waist-to-height ratio (WHtR)", "topics": [ "calculate_waist_height_ratio" ] }, { "page": "categorize_ckd", "title": "Chronic kidney disease (CKD) derived variable", "topics": [ "categorize_ckd" ] }, { "page": "categorize_diet_quality", "title": "Categorical diet indicator", "topics": [ "categorize_diet_quality" ] }, { "page": "categorize_exercise", "title": "Categorical weekly moderate-to-vigorous physical activity (MVPA) indicator", "topics": [ "categorize_exercise" ] }, { "page": "categorize_income_quintile", "title": "Categorical adjusted household income", "topics": [ "categorize_income_quintile" ] }, { "page": "categorize_nonhdl", "title": "Categorical non-HDL cholesterol level", "topics": [ "categorize_nonhdl" ] }, { "page": "cycle1", "title": "Canadian Health Measures Survey (CHMS) Cycle 1", "topics": [ "cycle1" ] }, { "page": "cycle1_meds", "title": "Canadian Health Measures Survey (CHMS) Cycle 1 Medications", "topics": [ "cycle1_meds" ] }, { "page": "cycle2", "title": "Canadian Health Measures Survey (CHMS) Cycle 2", "topics": [ "cycle2" ] }, { "page": "cycle2_meds", "title": "Canadian Health Measures Survey (CHMS) Cycle 2 Medications", "topics": [ "cycle2_meds" ] }, { "page": "cycle3", "title": "Canadian Health Measures Survey (CHMS) Cycle 3", "topics": [ "cycle3" ] }, { "page": "cycle3_meds", "title": "Canadian Health Measures Survey (CHMS) Cycle 3 Medications", "topics": [ "cycle3_meds" ] }, { "page": "cycle4", "title": "Canadian Health Measures Survey (CHMS) Cycle 4", "topics": [ "cycle4" ] }, { "page": "cycle4_meds", "title": "Canadian Health Measures Survey (CHMS) Cycle 4 Medications", "topics": [ "cycle4_meds" ] }, { "page": "cycle5", "title": "Canadian Health Measures Survey (CHMS) Cycle 5", "topics": [ "cycle5" ] }, { "page": "cycle5_meds", "title": "Canadian Health Measures Survey (CHMS) Cycle 5 Medications", "topics": [ "cycle5_meds" ] }, { "page": "cycle6", "title": "Canadian Health Measures Survey (CHMS) Cycle 6", "topics": [ "cycle6" ] }, { "page": "cycle6_meds", "title": "Canadian Health Measures Survey (CHMS) Cycle 6 Medications", "topics": [ "cycle6_meds" ] }, { "page": "derive_alcohol_risk", "title": "Low risk drinking score", "topics": [ "derive_alcohol_risk" ] }, { "page": "derive_alcohol_risk_detailed", "title": "Low risk drinking score - former/never categories", "topics": [ "derive_alcohol_risk_detailed" ] }, { "page": "derive_cvd_family_history", "title": "Cardiovascular Disease (CVD) family history", "topics": [ "derive_cvd_family_history" ] }, { "page": "derive_cvd_personal_history", "title": "Cardiovascular disease (CVD) personal history", "topics": [ "derive_cvd_personal_history" ] }, { "page": "derive_diabetes_status", "title": "Diabetes derived variable", "topics": [ "derive_diabetes_status" ] }, { "page": "derive_hypertension", "title": "Hypertension derived variable", "topics": [ "derive_hypertension" ] }, { "page": "derive_hypertension_adj", "title": "Hypertension derived variable with adjusted blood pressures", "topics": [ "derive_hypertension_adj" ] }, { "page": "derive_hypertension_control", "title": "Controlled hypertension derived variable", "topics": [ "derive_hypertension_control" ] }, { "page": "derive_hypertension_control_adj", "title": "Controlled hypertension derived variable with adjusted blood pressures", "topics": [ "derive_hypertension_control_adj" ] }, { "page": "is_ace_inhibitor", "title": "ACE inhibitors", "topics": [ "is_ace_inhibitor" ] }, { "page": "is_ace_med_cycles1to2", "title": "ACE inhibitors - cycles 1-2", "topics": [ "is_ace_med_cycles1to2" ] }, { "page": "is_any_antihtn_med", "title": "Any anti-hypertensive medications", "topics": [ "is_any_antihtn_med" ] }, { "page": "is_any_htn_med_cycles1to2", "title": "Any anti-hypertensive medications - cycles 1-2", "topics": [ "is_any_htn_med_cycles1to2" ] }, { "page": "is_bb_med_cycles1to2", "title": "Beta blockers - cycles 1-2", "topics": [ "is_bb_med_cycles1to2" ] }, { "page": "is_beta_blocker", "title": "Beta blockers", "topics": [ "is_beta_blocker" ] }, { "page": "is_calcium_channel_blocker", "title": "Calcium channel blockers", "topics": [ "is_calcium_channel_blocker" ] }, { "page": "is_ccb_med_cycles1to2", "title": "Calcium channel blockers - cycles 1-2", "topics": [ "is_ccb_med_cycles1to2" ] }, { "page": "is_diab_med_cycles1to2", "title": "Diabetes medications - cycles 1-2", "topics": [ "is_diab_med_cycles1to2" ] }, { "page": "is_diabetes_med", "title": "Diabetes medications", "topics": [ "is_diabetes_med" ] }, { "page": "is_diur_med_cycles1to2", "title": "Diuretics - cycles 1-2", "topics": [ "is_diur_med_cycles1to2" ] }, { "page": "is_diuretic", "title": "Diuretics", "topics": [ "is_diuretic" ] }, { "page": "is_lowest_income_quintile", "title": "Lowest income quintile indicator", "topics": [ "is_lowest_income_quintile" ] }, { "page": "is_misc_htn_med_cycles1to2", "title": "Other anti-hypertensive medications - cycles 1-2", "topics": [ "is_misc_htn_med_cycles1to2" ] }, { "page": "is_nsaid", "title": "Non-steroidal anti-inflammatory drugs (NSAIDs)", "topics": [ "is_nsaid" ] }, { "page": "is_nsaid_med_cycles1to2", "title": "Non-steroidal anti-inflammatory drugs (NSAIDs) - cycles 1-2", "topics": [ "is_nsaid_med_cycles1to2" ] }, { "page": "is_other_antihtn_med", "title": "Other anti-hypertensive medications", "topics": [ "is_other_antihtn_med" ] }, { "page": "recode_after_meds", "title": "Recode variables that depend on derived medication variable inputs", "topics": [ "recode_after_meds" ] }, { "page": "recode_meds_cycles1to2", "title": "Recode medication variables for cycles 1-2 (wide format)", "topics": [ "recode_meds_cycles1to2" ] }, { "page": "recode_meds_cycles3to6", "title": "Recode medication variables for cycles 3-6 (long format)", "topics": [ "recode_meds_cycles3to6" ] }, { "page": "variable_details", "title": "variable-details.csv", "topics": [ "variable_details" ] }, { "page": "variables", "title": "variables.csv", "topics": [ "variables" ] } ], "_pkglogo": "https://github.com/big-life-lab/chmsflow/raw/HEAD/man/figures/logo.svg", "_readme": "https://github.com/big-life-lab/chmsflow/raw/HEAD/README.md", "_rundeps": [ "bit", "bit64", "cli", "clipr", "cpp11", "crayon", "datawizard", "dplyr", "forcats", "generics", "glue", "haven", "hms", "insight", "lifecycle", "magrittr", "pillar", "pkgconfig", "prettyunits", "progress", "purrr", "R6", "readr", "recodeflow", "rlang", "sjlabelled", "stringi", "stringr", "tibble", "tidyr", "tidyselect", "tzdb", "utf8", "vctrs", "vroom", "withr" ], "_score": 3.6989700043360187, "_indexed": true, "_nocasepkg": "chmsflow", "_universes": [ "big-life-lab", "rafdoodle" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.1.0", "date": "2026-06-09T16:37:35.000Z", "distro": "noble", "commit": "55550b80885b223e70ee618b02731f5a98b3d548", "fileid": "5d1716a2b77d412cbf95c2a98b6e224ebca1da90ca220cf16d3b48ec25c399c3", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/big-life-lab/actions/runs/27220767477" }, { "r": "4.6.0", "os": "linux", "version": "0.1.0", "date": "2026-06-09T16:37:32.000Z", "distro": "noble", "commit": "55550b80885b223e70ee618b02731f5a98b3d548", "fileid": "5eb448173ac3eefac434c0a47b6e104bfdf9b8c6f9686c9597d3dd125defbf72", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/big-life-lab/actions/runs/27220767477" }, { "r": "4.5.3", "os": "mac", "version": "0.1.0", "date": "2026-06-09T16:38:45.000Z", "commit": "55550b80885b223e70ee618b02731f5a98b3d548", "fileid": "acecba5e9bff6f39158a97676c25353850cc27dacdfac3fb8f8088fca753afd9", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/big-life-lab/actions/runs/27220767477" }, { "r": "4.6.0", "os": "mac", "version": "0.1.0", "date": "2026-06-09T16:38:08.000Z", "commit": "55550b80885b223e70ee618b02731f5a98b3d548", "fileid": "b70d0ca073042db2f796131f93eb931696f845269abeed827b825b679123894e", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/big-life-lab/actions/runs/27220767477" }, { "r": "4.6.0", "os": "wasm", "version": "0.1.0", "date": "2026-06-09T16:37:43.000Z", "commit": "55550b80885b223e70ee618b02731f5a98b3d548", "fileid": "4c1e730e4fbc8545e244f15ff8784b0ec559e8324dd809026f4dedacb96e54d8", "status": "success", "buildurl": "https://github.com/r-universe/big-life-lab/actions/runs/27220767477" }, { "r": "4.7.0", "os": "win", "version": "0.1.0", "date": "2026-06-09T16:37:20.000Z", "commit": "55550b80885b223e70ee618b02731f5a98b3d548", "fileid": "aa98726b252b7bbac98cc543b30c1182d195a33be632f4f4f6e1e95a31d20054", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/big-life-lab/actions/runs/27220767477" }, { "r": "4.5.3", "os": "win", "version": "0.1.0", "date": "2026-06-09T16:38:48.000Z", "commit": "55550b80885b223e70ee618b02731f5a98b3d548", "fileid": "28a35408addeac9e9a46c2b4457aa5b0f93df4dd9227830c0bc274896a4902fc", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/big-life-lab/actions/runs/27220767477" }, { "r": "4.6.0", "os": "win", "version": "0.1.0", "date": "2026-06-09T16:37:43.000Z", "commit": "55550b80885b223e70ee618b02731f5a98b3d548", "fileid": "9523b949b4bff312c4e4853dd12167030ee8a54819027ca5d1855b54ab9452da", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/big-life-lab/actions/runs/27220767477" } ] }